Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
SLC1A1P43005 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
SLC1A1P43005 MORF4L1P1-201ENST00000404582 967 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 MIR1269A-201ENST00000408636 105 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.66□□□□□ -1.02
SLC1A1P43005 AL441963.1-201ENST00000435137 792 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 RPL35P4-201ENST00000446039 322 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 RN7SL337P-201ENST00000462468 301 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 RN7SL305P-201ENST00000464862 281 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 RPL36P16-201ENST00000496996 306 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC8.66□□□□□ -1.02
SLC1A1P43005 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 AC106774.1-201ENST00000515105 321 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 AL352979.1-201ENST00000554238 297 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 AC015871.1-201ENST00000557880 1081 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 ANP32BP1-201ENST00000564205 1297 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 GLUD1P2-201ENST00000583339 201 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 GLUD1P8-201ENST00000585063 203 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.66□□□□□ -1.02
SLC1A1P43005 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.66□□□□□ -1.02
SLC1A1P43005 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.66□□□□□ -1.02
SLC1A1P43005 RBM22P4-201ENST00000613117 1240 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 AL157359.3-201ENST00000623771 217 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
SLC1A1P43005 AC008985.1-201ENST00000624169 2239 ntBASIC8.66□□□□□ -1.02
SLC1A1P43005 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.66□□□□□ -1.02
SLC1A1P43005 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SLC1A1P43005 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.66□□□□□ -1.02
SLC1A1P43005 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC108099.1-201ENST00000564402 3258 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC009108.3-201ENST00000602739 3515 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
SLC1A1P43005 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 BMS1P1-201ENST00000374336 1332 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 MAPK10-371ENST00000641952 5209 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 TMEM254-203ENST00000372275 860 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 SNORA14B-201ENST00000384452 135 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 EIF4A1P8-201ENST00000394444 1190 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AL590286.1-201ENST00000404178 291 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 EEF1A1P31-201ENST00000415978 1131 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 PUDPP1-201ENST00000421058 495 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 SDHDP2-201ENST00000436937 465 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 FTH1P27-201ENST00000449509 551 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.65□□□□□ -1.02
SLC1A1P43005 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC8.65□□□□□ -1.02
SLC1A1P43005 TRIM60P15-201ENST00000509929 712 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 OR10J2P-201ENST00000514684 961 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AP000915.1-201ENST00000580756 548 ntTSL 3 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 FAM30B-201ENST00000611556 397 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 AC104237.3-201ENST00000611809 427 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.65□□□□□ -1.02
SLC1A1P43005 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SLC1A1P43005 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
SLC1A1P43005 XRCC6P5-201ENST00000435236 1795 ntBASIC8.65□□□□□ -1.02
SLC1A1P43005 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SLC1A1P43005 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.65□□□□□ -1.03
SLC1A1P43005 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SLC1A1P43005 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SLC1A1P43005 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms