Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 SAP18P3-201ENST00000449663 396 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 HSD3BP4-201ENST00000511509 1120 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.81□□□□□ -1
LMO3Q8TAP4 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 RN7SL155P-201ENST00000581538 263 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC8.81□□□□□ -1
LMO3Q8TAP4 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 MIR4266-201ENST00000583300 55 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 AC112187.3-201ENST00000607844 408 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 AL356095.2-201ENST00000624025 457 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 RHOXF1P2-201ENST00000635431 502 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.81□□□□□ -1
LMO3Q8TAP4 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 WASF4P-201ENST00000444248 1494 ntBASIC8.81□□□□□ -1
LMO3Q8TAP4 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 AP001442.1-206ENST00000600590 1573 ntTSL 5 BASIC8.81□□□□□ -1
LMO3Q8TAP4 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.81□□□□□ -1
LMO3Q8TAP4 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.81□□□□□ -1
LMO3Q8TAP4 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
LMO3Q8TAP4 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 LINC00663-203ENST00000586885 2546 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC8.8□□□□□ -1
LMO3Q8TAP4 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.8□□□□□ -1
LMO3Q8TAP4 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC8.8□□□□□ -1
LMO3Q8TAP4 MIR1272-201ENST00000408106 129 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 AC003080.1-201ENST00000413552 767 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC073475.1-201ENST00000434012 592 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 RPL12P5-201ENST00000475149 392 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 RN7SL864P-201ENST00000493457 285 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 MTND6P16-201ENST00000504006 520 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC139783.1-201ENST00000515618 681 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 MTND6P20-201ENST00000522986 418 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 AL161729.2-201ENST00000605700 456 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 AC104237.3-201ENST00000611809 427 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.8□□□□□ -1
LMO3Q8TAP4 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.8□□□□□ -1
LMO3Q8TAP4 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.8□□□□□ -1
LMO3Q8TAP4 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.8□□□□□ -1
LMO3Q8TAP4 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
LMO3Q8TAP4 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms