Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 AL356432.2-201ENST00000407841 422 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 EEF1A1P31-201ENST00000415978 1131 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC9.12□□□□□ -0.95
UBE4BO95155 AL031733.1-201ENST00000422817 455 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 EIF4A1P10-201ENST00000428832 1216 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 AL356498.1-201ENST00000443334 334 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC9.12□□□□□ -0.95
UBE4BO95155 RPS29P16-201ENST00000452798 171 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 NDUFB11P1-201ENST00000455818 465 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 RN7SL856P-201ENST00000461754 298 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC114812.3-201ENST00000509542 730 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AC226119.2-201ENST00000513501 530 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC9.12□□□□□ -0.95
UBE4BO95155 AC021006.2-201ENST00000526978 859 ntTSL 3 BASIC9.12□□□□□ -0.95
UBE4BO95155 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 OR1X1P-201ENST00000606159 931 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AC016876.3-201ENST00000610459 426 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
UBE4BO95155 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 SND1-IT1-201ENST00000623342 2481 ntBASIC9.12□□□□□ -0.95
UBE4BO95155 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
UBE4BO95155 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
UBE4BO95155 AC007614.2-201ENST00000569877 1851 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 FAM218BP-201ENST00000408897 458 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 RPS10P2-201ENST00000430953 494 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 OR51R1P-201ENST00000435309 952 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 RPS3AP29-201ENST00000437728 769 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 AL365436.1-201ENST00000452587 495 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 RPSAP54-201ENST00000454001 886 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 RN7SKP197-201ENST00000517077 297 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 OR4C9P-201ENST00000532368 925 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC131159.2-201ENST00000613236 702 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 GPC6-202ENST00000617456 792 ntTSL 3 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC103691.1-201ENST00000619654 520 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 AC013489.3-201ENST00000623274 517 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 OLMALINC-206ENST00000641799 1195 ntBASIC9.11□□□□□ -0.95
UBE4BO95155 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC9.11□□□□□ -0.95
UBE4BO95155 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms