Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1G3Q9Y6M4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1G3Q9Y6M4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1G3Q9Y6M4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.91■□□□□ 0.78
CSNK1G3Q9Y6M4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CSNK1G3Q9Y6M4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 AL390719.1-204ENST00000412397 1219 ntBASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 MTDHP1-201ENST00000605323 784 ntBASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 AL137060.1-201ENST00000618151 2648 ntBASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1G3Q9Y6M4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.78
CSNK1G3Q9Y6M4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1G3Q9Y6M4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 AC133681.1-201ENST00000465482 601 ntBASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 MIR4497-201ENST00000583208 89 ntBASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 AL121603.2-201ENST00000557373 2117 ntBASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1G3Q9Y6M4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 AC011484.1-201ENST00000377652 1995 ntBASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 Z99916.2-201ENST00000604037 246 ntBASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1G3Q9Y6M4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms