Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 AL138781.1-201ENST00000566567 1274 ntBASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
ECHDC1Q9NTX5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 ID1-201ENST00000376105 1233 ntBASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ECHDC1Q9NTX5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
ECHDC1Q9NTX5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ECHDC1Q9NTX5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 AC142086.2-201ENST00000569753 217 ntBASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 MIR4758-201ENST00000577688 71 ntBASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.75■■□□□ 1.55
ECHDC1Q9NTX5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms