Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 AC006970.2-201ENST00000450065 779 ntBASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 AF201337.1-201ENST00000520239 748 ntBASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 CYP2T3P-201ENST00000601990 817 ntBASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.68■□□□□ 0.58
UBQLN4Q9NRR5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 AC093787.1-201ENST00000450396 207 ntBASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 AL050303.2-201ENST00000619798 666 ntBASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN4Q9NRR5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 AC092667.1-201ENST00000434301 2586 ntBASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 AC105036.2-201ENST00000569468 176 ntBASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN4Q9NRR5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 AL589743.5-201ENST00000616611 1050 ntBASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 AC105020.6-201ENST00000621523 1217 ntBASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms