Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.08■□□□□ 0.96
HERPUD2Q9BSE4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HERPUD2Q9BSE4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HERPUD2Q9BSE4 DPP3P2-201ENST00000416030 1696 ntBASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 PKD1P6-201ENST00000343738 4769 ntBASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERPUD2Q9BSE4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 AL137784.2-201ENST00000607332 1000 ntBASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.04■□□□□ 0.96
HERPUD2Q9BSE4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HERPUD2Q9BSE4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HERPUD2Q9BSE4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HERPUD2Q9BSE4 AL691432.2-201ENST00000607222 2038 ntBASIC21.02■□□□□ 0.96
HERPUD2Q9BSE4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms