Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AP001412.1-201ENST00000608405 714 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 MIR2861-201ENST00000636310 90 ntBASIC21.82■■□□□ 1.08
CASD1Q96PB1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASD1Q96PB1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASD1Q96PB1 Z98882.1-201ENST00000622160 2253 ntBASIC21.81■■□□□ 1.08
CASD1Q96PB1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.81■■□□□ 1.08
CASD1Q96PB1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 AC023632.3-201ENST00000521633 145 ntBASIC21.8■■□□□ 1.08
CASD1Q96PB1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.8■■□□□ 1.08
CASD1Q96PB1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASD1Q96PB1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 TSPY15P-201ENST00000457163 923 ntBASIC21.79■■□□□ 1.08
CASD1Q96PB1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 PRKY-204ENST00000533551 1019 ntBASIC21.79■■□□□ 1.08
CASD1Q96PB1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASD1Q96PB1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CASD1Q96PB1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.78■■□□□ 1.08
CASD1Q96PB1 AL121829.2-201ENST00000620908 328 ntBASIC21.78■■□□□ 1.08
CASD1Q96PB1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.78■■□□□ 1.08
CASD1Q96PB1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASD1Q96PB1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.77■■□□□ 1.08
CASD1Q96PB1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.77■■□□□ 1.08
CASD1Q96PB1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.77■■□□□ 1.08
CASD1Q96PB1 MIR4785-201ENST00000585005 73 ntBASIC21.77■■□□□ 1.08
CASD1Q96PB1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASD1Q96PB1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.77■■□□□ 1.08
CASD1Q96PB1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASD1Q96PB1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.76■■□□□ 1.07
CASD1Q96PB1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms