Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 AC010947.1-201ENST00000623454 693 ntBASIC17.3■□□□□ 0.36
SPG11Q96JI7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 TERF1P1-201ENST00000311003 1181 ntBASIC17.3■□□□□ 0.36
SPG11Q96JI7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SPG11Q96JI7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 AC006557.6-201ENST00000623071 864 ntBASIC17.29■□□□□ 0.36
SPG11Q96JI7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPG11Q96JI7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.29■□□□□ 0.36
SPG11Q96JI7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPG11Q96JI7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.28■□□□□ 0.36
SPG11Q96JI7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.28■□□□□ 0.36
SPG11Q96JI7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPG11Q96JI7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SPG11Q96JI7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SPG11Q96JI7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPG11Q96JI7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.27■□□□□ 0.36
SPG11Q96JI7 WWOX-216ENST00000569818 525 ntBASIC17.27■□□□□ 0.36
SPG11Q96JI7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SPG11Q96JI7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SPG11Q96JI7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPG11Q96JI7 HTR7P1-201ENST00000538670 1336 ntBASIC17.27■□□□□ 0.35
SPG11Q96JI7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SPG11Q96JI7 DUX4L26-201ENST00000489078 1255 ntBASIC17.27■□□□□ 0.35
SPG11Q96JI7 KRT126P-201ENST00000549467 1181 ntBASIC17.27■□□□□ 0.35
SPG11Q96JI7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SPG11Q96JI7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.26■□□□□ 0.35
SPG11Q96JI7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.26■□□□□ 0.35
SPG11Q96JI7 KRT16P5-201ENST00000455284 522 ntBASIC17.26■□□□□ 0.35
SPG11Q96JI7 AC116562.2-201ENST00000507042 360 ntBASIC17.26■□□□□ 0.35
SPG11Q96JI7 AP000525.1-201ENST00000608286 694 ntBASIC17.26■□□□□ 0.35
SPG11Q96JI7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPG11Q96JI7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms