Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AL356652.1-201ENST00000615962 565 ntBASIC21.33■■□□□ 1.01
RNF139Q8WU17 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RNF139Q8WU17 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.33■■□□□ 1
RNF139Q8WU17 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF139Q8WU17 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.33■■□□□ 1
RNF139Q8WU17 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RNF139Q8WU17 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.32■■□□□ 1
RNF139Q8WU17 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
RNF139Q8WU17 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF139Q8WU17 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.32■■□□□ 1
RNF139Q8WU17 AC091874.3-201ENST00000512672 1195 ntBASIC21.32■■□□□ 1
RNF139Q8WU17 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.32■■□□□ 1
RNF139Q8WU17 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.32■■□□□ 1
RNF139Q8WU17 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF139Q8WU17 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RNF139Q8WU17 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF139Q8WU17 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF139Q8WU17 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF139Q8WU17 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF139Q8WU17 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.31■■□□□ 1
RNF139Q8WU17 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF139Q8WU17 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.31■■□□□ 1
RNF139Q8WU17 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.31■■□□□ 1
RNF139Q8WU17 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF139Q8WU17 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF139Q8WU17 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.3■■□□□ 1
RNF139Q8WU17 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF139Q8WU17 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF139Q8WU17 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF139Q8WU17 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF139Q8WU17 MIR2861-201ENST00000636310 90 ntBASIC21.3■■□□□ 1
RNF139Q8WU17 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RNF139Q8WU17 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.3■■□□□ 1
RNF139Q8WU17 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
RNF139Q8WU17 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RNF139Q8WU17 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.3■■□□□ 1
RNF139Q8WU17 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.29■■□□□ 1
RNF139Q8WU17 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.29■■□□□ 1
RNF139Q8WU17 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.29■■□□□ 1
RNF139Q8WU17 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF139Q8WU17 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.29■■□□□ 1
RNF139Q8WU17 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.29■■□□□ 1
RNF139Q8WU17 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF139Q8WU17 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.29■■□□□ 1
RNF139Q8WU17 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.28■■□□□ 1
RNF139Q8WU17 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RNF139Q8WU17 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.28■■□□□ 1
RNF139Q8WU17 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF139Q8WU17 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RNF139Q8WU17 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.28■■□□□ 1
RNF139Q8WU17 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF139Q8WU17 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.28■■□□□ 1
RNF139Q8WU17 MYC-209ENST00000641252 345 ntBASIC21.28■■□□□ 1
RNF139Q8WU17 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
RNF139Q8WU17 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF139Q8WU17 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms