Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AC060766.5-201ENST00000590539 871 ntBASIC21.31■■□□□ 1
TTC16Q8NEE8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC16Q8NEE8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TTC16Q8NEE8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TTC16Q8NEE8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TTC16Q8NEE8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC16Q8NEE8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC16Q8NEE8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC16Q8NEE8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
TTC16Q8NEE8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.3■■□□□ 1
TTC16Q8NEE8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TTC16Q8NEE8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 PNMA6B-201ENST00000538162 1200 ntBASIC21.3■■□□□ 1
TTC16Q8NEE8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.3■■□□□ 1
TTC16Q8NEE8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 AC105020.6-201ENST00000621523 1217 ntBASIC21.3■■□□□ 1
TTC16Q8NEE8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.3■■□□□ 1
TTC16Q8NEE8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TTC16Q8NEE8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TTC16Q8NEE8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
TTC16Q8NEE8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TTC16Q8NEE8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TTC16Q8NEE8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.29■■□□□ 1
TTC16Q8NEE8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TTC16Q8NEE8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.29■■□□□ 1
TTC16Q8NEE8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.29■■□□□ 1
TTC16Q8NEE8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.29■■□□□ 1
TTC16Q8NEE8 HLA-B-256ENST00000639848 1089 ntBASIC21.29■■□□□ 1
TTC16Q8NEE8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
TTC16Q8NEE8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TTC16Q8NEE8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TTC16Q8NEE8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TTC16Q8NEE8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.28■■□□□ 1
TTC16Q8NEE8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.28■■□□□ 1
TTC16Q8NEE8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.28■■□□□ 1
TTC16Q8NEE8 SOX15-203ENST00000570788 1093 ntBASIC21.28■■□□□ 1
TTC16Q8NEE8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.28■■□□□ 1
TTC16Q8NEE8 Z98882.1-201ENST00000622160 2253 ntBASIC21.28■■□□□ 1
TTC16Q8NEE8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TTC16Q8NEE8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.28■■□□□ 1
TTC16Q8NEE8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.28■■□□□ 1
TTC16Q8NEE8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.28■■□□□ 1
TTC16Q8NEE8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.28■■□□□ 1
TTC16Q8NEE8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.27■■□□□ 1
TTC16Q8NEE8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TTC16Q8NEE8 GCSHP5-201ENST00000443090 522 ntBASIC21.27■■□□□ 1
TTC16Q8NEE8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TTC16Q8NEE8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.27■■□□□ 1
TTC16Q8NEE8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TTC16Q8NEE8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TTC16Q8NEE8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TTC16Q8NEE8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms