Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCA5Q86VQ0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCA5Q86VQ0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LCA5Q86VQ0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCA5Q86VQ0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 IRS3P-201ENST00000223076 1006 ntBASIC20.2■□□□□ 0.82
LCA5Q86VQ0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 AC027612.3-201ENST00000413684 1047 ntBASIC20.2■□□□□ 0.82
LCA5Q86VQ0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LCA5Q86VQ0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L2-201ENST00000561772 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L6-201ENST00000626483 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L1-201ENST00000627662 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L8-201ENST00000629013 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L3-201ENST00000630187 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L7-201ENST00000630678 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DUX4L5-201ENST00000630834 1275 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 TCF3P1-201ENST00000423021 1937 ntBASIC20.19■□□□□ 0.82
LCA5Q86VQ0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCA5Q86VQ0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 KRT18P20-201ENST00000548986 1279 ntBASIC20.18■□□□□ 0.82
LCA5Q86VQ0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
LCA5Q86VQ0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5Q86VQ0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms