Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC11.26□□□□□ -0.61
UBR4Q5T4S7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 AC026271.3-201ENST00000571884 352 ntBASIC11.25□□□□□ -0.61
UBR4Q5T4S7 HYMAI.1-201ENST00000620949 238 ntBASIC11.25□□□□□ -0.61
UBR4Q5T4S7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 AC008175.2-201ENST00000612840 297 ntBASIC11.25□□□□□ -0.61
UBR4Q5T4S7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 IL9RP2-201ENST00000423948 1312 ntBASIC11.25□□□□□ -0.61
UBR4Q5T4S7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
UBR4Q5T4S7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 GK-202ENST00000378941 458 ntTSL 3 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 SART3-203ENST00000546611 1184 ntBASIC11.24□□□□□ -0.61
UBR4Q5T4S7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 NBPF21P-201ENST00000425093 1451 ntBASIC11.24□□□□□ -0.61
UBR4Q5T4S7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBR4Q5T4S7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UBR4Q5T4S7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 IFNL4P1-201ENST00000607083 540 ntBASIC11.22□□□□□ -0.61
UBR4Q5T4S7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.22□□□□□ -0.61
UBR4Q5T4S7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms