Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 CDC20YGL116W 1833 nt2.95□□□□□ -1.94
HDA1P53973 GIN4YDR507C 3429 nt2.94□□□□□ -1.94
HDA1P53973 DNA2YHR164C 4569 nt2.94□□□□□ -1.94
HDA1P53973 DUF1YOL087C 3351 nt2.94□□□□□ -1.94
HDA1P53973 snR76snR76 109 nt2.94□□□□□ -1.94
HDA1P53973 HTB2YBL002W 396 nt2.94□□□□□ -1.94
HDA1P53973 YMR046W-AYMR046W-A 129 nt2.94□□□□□ -1.94
HDA1P53973 PAC1YOR269W 1485 nt2.94□□□□□ -1.94
HDA1P53973 KAR3YPR141C 2190 nt2.94□□□□□ -1.94
HDA1P53973 YLR278CYLR278C 4026 nt2.93□□□□□ -1.94
HDA1P53973 YDR048CYDR048C 315 nt2.93□□□□□ -1.94
HDA1P53973 YGL014C-AYGL014C-A 162 nt2.93□□□□□ -1.94
HDA1P53973 NEW1YPL226W 3591 nt2.93□□□□□ -1.94
HDA1P53973 TCB2YNL087W 3537 nt2.93□□□□□ -1.94
HDA1P53973 PSK1YAL017W 4071 nt2.93□□□□□ -1.94
HDA1P53973 OSH6YKR003W 1347 nt2.93□□□□□ -1.94
HDA1P53973 DSE4YNR067C 3354 nt2.92□□□□□ -1.94
HDA1P53973 snR80snR80 171 nt2.92□□□□□ -1.94
HDA1P53973 YDR406W-AYDR406W-A 246 nt2.92□□□□□ -1.94
HDA1P53973 YGL024WYGL024W 336 nt2.92□□□□□ -1.94
HDA1P53973 TAF2YCR042C 4224 nt2.92□□□□□ -1.94
HDA1P53973 YBL005W-BYBL005W-B 5268 nt2.91□□□□□ -1.94
HDA1P53973 QCR7YDR529C 384 nt2.91□□□□□ -1.94
HDA1P53973 PNC1YGL037C 651 nt2.91□□□□□ -1.94
HDA1P53973 MF(ALPHA)1YPL187W 498 nt2.91□□□□□ -1.94
HDA1P53973 YDR186CYDR186C 2634 nt2.91□□□□□ -1.94
HDA1P53973 PDR1YGL013C 3207 nt2.91□□□□□ -1.94
HDA1P53973 CDC36YDL165W 576 nt2.9□□□□□ -1.95
HDA1P53973 DYN2YDR424C 279 nt2.9□□□□□ -1.95
HDA1P53973 RGM1YMR182C 636 nt2.9□□□□□ -1.95
HDA1P53973 DIS3YOL021C 3006 nt2.9□□□□□ -1.95
HDA1P53973 DNL4YOR005C 2835 nt2.89□□□□□ -1.95
HDA1P53973 RBK1YCR036W 1002 nt2.89□□□□□ -1.95
HDA1P53973 DBP6YNR038W 1890 nt2.89□□□□□ -1.95
HDA1P53973 FRE2YKL220C 2136 nt2.89□□□□□ -1.95
HDA1P53973 PTP3YER075C 2787 nt2.89□□□□□ -1.95
HDA1P53973 YDL025W-AYDL025W-A 105 nt2.88□□□□□ -1.95
HDA1P53973 snR49snR49 165 nt2.88□□□□□ -1.95
HDA1P53973 RLI1YDR091C 1827 nt2.88□□□□□ -1.95
HDA1P53973 SEC7YDR170C 6030 nt2.88□□□□□ -1.95
HDA1P53973 KSP1YHR082C 3090 nt2.88□□□□□ -1.95
HDA1P53973 SNQ2YDR011W 4506 nt2.87□□□□□ -1.95
HDA1P53973 IPT1YDR072C 1584 nt2.87□□□□□ -1.95
HDA1P53973 RSN1YMR266W 2862 nt2.87□□□□□ -1.95
HDA1P53973 NET1YJL076W 3570 nt2.87□□□□□ -1.95
HDA1P53973 YIL059CYIL059C 366 nt2.87□□□□□ -1.95
HDA1P53973 YIL102CYIL102C 306 nt2.87□□□□□ -1.95
HDA1P53973 YIL156W-BYIL156W-B 222 nt2.87□□□□□ -1.95
HDA1P53973 EMC6YLL014W 327 nt2.87□□□□□ -1.95
HDA1P53973 YOR055WYOR055W 435 nt2.87□□□□□ -1.95
HDA1P53973 RTC6YPL183W-A 282 nt2.87□□□□□ -1.95
HDA1P53973 RGR1YLR071C 3249 nt2.87□□□□□ -1.95
HDA1P53973 DBP7YKR024C 2229 nt2.87□□□□□ -1.95
HDA1P53973 DOT6YER088C 2013 nt2.86□□□□□ -1.95
HDA1P53973 SEC26YDR238C 2922 nt2.86□□□□□ -1.95
HDA1P53973 NCL1YBL024W 2055 nt2.86□□□□□ -1.95
HDA1P53973 GUP1YGL084C 1683 nt2.86□□□□□ -1.95
HDA1P53973 PHS1YJL097W 654 nt2.86□□□□□ -1.95
HDA1P53973 RPL20AYMR242C 519 nt2.86□□□□□ -1.95
HDA1P53973 YPR203WYPR203W 309 nt2.86□□□□□ -1.95
HDA1P53973 DAD3YBR233W-A 285 nt2.86□□□□□ -1.95
HDA1P53973 YJL070CYJL070C 2667 nt2.86□□□□□ -1.95
HDA1P53973 YPR089WYPR089W 2667 nt2.86□□□□□ -1.95
HDA1P53973 MPH1YIR002C 2982 nt2.85□□□□□ -1.95
HDA1P53973 SGD1YLR336C 2700 nt2.85□□□□□ -1.95
HDA1P53973 PTC5YOR090C 1719 nt2.85□□□□□ -1.95
HDA1P53973 YGL007C-AYGL007C-A 87 nt2.85□□□□□ -1.95
HDA1P53973 YHL042WYHL042W 453 nt2.85□□□□□ -1.95
HDA1P53973 YIL032CYIL032C 357 nt2.85□□□□□ -1.95
HDA1P53973 SDH2YLL041C 801 nt2.85□□□□□ -1.95
HDA1P53973 YOR008C-AYOR008C-A 225 nt2.85□□□□□ -1.95
HDA1P53973 RAD61YDR014W 1944 nt2.85□□□□□ -1.95
HDA1P53973 YDL062WYDL062W 426 nt2.84□□□□□ -1.95
HDA1P53973 LSM7YNL147W 348 nt2.84□□□□□ -1.95
HDA1P53973 SAR1YPL218W 573 nt2.84□□□□□ -1.95
HDA1P53973 ARP7YPR034W 1434 nt2.84□□□□□ -1.96
HDA1P53973 RIM20YOR275C 1986 nt2.83□□□□□ -1.96
HDA1P53973 SAK1YER129W 3429 nt2.83□□□□□ -1.96
HDA1P53973 INP52YNL106C 3552 nt2.83□□□□□ -1.96
HDA1P53973 UBP11YKR098C 2154 nt2.83□□□□□ -1.96
HDA1P53973 YAL059C-AYAL059C-A 423 nt2.83□□□□□ -1.96
HDA1P53973 GRX8YLR364W 330 nt2.83□□□□□ -1.96
HDA1P53973 RPL36AYMR194W 303 nt2.83□□□□□ -1.96
HDA1P53973 MRPL33YMR286W 261 nt2.83□□□□□ -1.96
HDA1P53973 BCK1YJL095W 4437 nt2.83□□□□□ -1.96
HDA1P53973 JSN1YJR091C 3276 nt2.82□□□□□ -1.96
HDA1P53973 DFG16YOR030W 1860 nt2.82□□□□□ -1.96
HDA1P53973 YFH1YDL120W 525 nt2.82□□□□□ -1.96
HDA1P53973 ALG13YGL047W 609 nt2.82□□□□□ -1.96
HDA1P53973 YHL041WYHL041W 450 nt2.82□□□□□ -1.96
HDA1P53973 YLR053CYLR053C 327 nt2.82□□□□□ -1.96
HDA1P53973 ABF2YMR072W 552 nt2.82□□□□□ -1.96
HDA1P53973 YMR307C-AYMR307C-A 195 nt2.82□□□□□ -1.96
HDA1P53973 SNU114YKL173W 3027 nt2.82□□□□□ -1.96
HDA1P53973 RTT10YPL183C 3042 nt2.82□□□□□ -1.96
HDA1P53973 PDR3YBL005W 2931 nt2.82□□□□□ -1.96
HDA1P53973 YLR154W-EYLR154W-E 204 nt2.81□□□□□ -1.96
HDA1P53973 YLR294CYLR294C 330 nt2.81□□□□□ -1.96
HDA1P53973 YOL155W-AYOL155W-A 135 nt2.81□□□□□ -1.96
HDA1P53973 HCS1YKL017C 2052 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms