Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 YFL065CYFL065C 309 nt3.19□□□□□ -1.9
PEX28P38848 YLR154C-HYLR154C-H 132 nt3.19□□□□□ -1.9
PEX28P38848 YLR156C-AYLR156C-A 132 nt3.19□□□□□ -1.9
PEX28P38848 YLR157C-CYLR157C-C 132 nt3.19□□□□□ -1.9
PEX28P38848 YLR159C-AYLR159C-A 132 nt3.19□□□□□ -1.9
PEX28P38848 GRX8YLR364W 330 nt3.19□□□□□ -1.9
PEX28P38848 SPA2YLL021W 4401 nt3.19□□□□□ -1.9
PEX28P38848 NCL1YBL024W 2055 nt3.19□□□□□ -1.9
PEX28P38848 ROM1YGR070W 3468 nt3.18□□□□□ -1.9
PEX28P38848 YIL082W-AYIL082W-A 4497 nt3.18□□□□□ -1.9
PEX28P38848 KEL2YGR238C 2649 nt3.18□□□□□ -1.9
PEX28P38848 RGC1YPR115W 3252 nt3.18□□□□□ -1.9
PEX28P38848 MAK21YDR060W 3078 nt3.18□□□□□ -1.9
PEX28P38848 YGL069CYGL069C 465 nt3.18□□□□□ -1.9
PEX28P38848 GPG1YGL121C 381 nt3.18□□□□□ -1.9
PEX28P38848 PSK1YAL017W 4071 nt3.18□□□□□ -1.9
PEX28P38848 PFK26YIL107C 2484 nt3.18□□□□□ -1.9
PEX28P38848 SOK2YMR016C 2358 nt3.18□□□□□ -1.9
PEX28P38848 DAN4YJR151C 3486 nt3.18□□□□□ -1.9
PEX28P38848 DSE4YNR067C 3354 nt3.18□□□□□ -1.9
PEX28P38848 MVP1YMR004W 1536 nt3.18□□□□□ -1.9
PEX28P38848 SSM4YIL030C 3960 nt3.17□□□□□ -1.9
PEX28P38848 snR60snR60 104 nt3.17□□□□□ -1.9
PEX28P38848 YDL185C-AYDL185C-A 228 nt3.17□□□□□ -1.9
PEX28P38848 YER039C-AYER039C-A 219 nt3.17□□□□□ -1.9
PEX28P38848 PCC1YKR095W-A 267 nt3.17□□□□□ -1.9
PEX28P38848 SHH3YMR118C 591 nt3.17□□□□□ -1.9
PEX28P38848 SCW11YGL028C 1629 nt3.17□□□□□ -1.9
PEX28P38848 STT4YLR305C 5703 nt3.17□□□□□ -1.9
PEX28P38848 YME2YMR302C 2553 nt3.17□□□□□ -1.9
PEX28P38848 YOR296WYOR296W 3870 nt3.17□□□□□ -1.9
PEX28P38848 TOF2YKR010C 2316 nt3.16□□□□□ -1.9
PEX28P38848 PTC5YOR090C 1719 nt3.16□□□□□ -1.9
PEX28P38848 ALK2YBL009W 2031 nt3.16□□□□□ -1.9
PEX28P38848 BCH1YMR237W 2175 nt3.16□□□□□ -1.9
PEX28P38848 TFC1YBR123C 1950 nt3.16□□□□□ -1.9
PEX28P38848 PAN3YKL025C 2040 nt3.15□□□□□ -1.9
PEX28P38848 YGR250CYGR250C 2346 nt3.15□□□□□ -1.9
PEX28P38848 SNU114YKL173W 3027 nt3.15□□□□□ -1.9
PEX28P38848 DNL4YOR005C 2835 nt3.15□□□□□ -1.91
PEX28P38848 YGL052WYGL052W 306 nt3.15□□□□□ -1.91
PEX28P38848 BFA1YJR053W 1725 nt3.15□□□□□ -1.91
PEX28P38848 ROG1YGL144C 2058 nt3.15□□□□□ -1.91
PEX28P38848 BMS1YPL217C 3552 nt3.15□□□□□ -1.91
PEX28P38848 HDA3YPR179C 1968 nt3.14□□□□□ -1.91
PEX28P38848 BUB1YGR188C 3066 nt3.14□□□□□ -1.91
PEX28P38848 YML007C-AYML007C-A 111 nt3.14□□□□□ -1.91
PEX28P38848 KSP1YHR082C 3090 nt3.14□□□□□ -1.91
PEX28P38848 STU2YLR045C 2667 nt3.14□□□□□ -1.91
PEX28P38848 GUP1YGL084C 1683 nt3.14□□□□□ -1.91
PEX28P38848 TSC11YER093C 4293 nt3.13□□□□□ -1.91
PEX28P38848 SMC3YJL074C 3693 nt3.13□□□□□ -1.91
PEX28P38848 UBP11YKR098C 2154 nt3.13□□□□□ -1.91
PEX28P38848 PAU2YEL049W 363 nt3.13□□□□□ -1.91
PEX28P38848 RPL23BYER117W 414 nt3.13□□□□□ -1.91
PEX28P38848 PRE4YFR050C 801 nt3.13□□□□□ -1.91
PEX28P38848 YOR302WYOR302W 78 nt3.13□□□□□ -1.91
PEX28P38848 VMA9YCL005W-A 222 nt3.13□□□□□ -1.91
PEX28P38848 VPS35YJL154C 2835 nt3.13□□□□□ -1.91
PEX28P38848 YPR089WYPR089W 2667 nt3.12□□□□□ -1.91
PEX28P38848 AUS1YOR011W 4185 nt3.12□□□□□ -1.91
PEX28P38848 YML037CYML037C 1023 nt3.12□□□□□ -1.91
PEX28P38848 YMR141W-AYMR141W-A 225 nt3.12□□□□□ -1.91
PEX28P38848 YNL028WYNL028W 318 nt3.12□□□□□ -1.91
PEX28P38848 YNL338WYNL338W 159 nt3.12□□□□□ -1.91
PEX28P38848 RGR1YLR071C 3249 nt3.12□□□□□ -1.91
PEX28P38848 ANB1YJR047C 474 nt3.11□□□□□ -1.91
PEX28P38848 TMN3YER113C 2121 nt3.1□□□□□ -1.91
PEX28P38848 FPR1YNL135C 345 nt3.1□□□□□ -1.91
PEX28P38848 SNC2YOR327C 348 nt3.1□□□□□ -1.91
PEX28P38848 NUT2YPR168W 474 nt3.1□□□□□ -1.91
PEX28P38848 CHO2YGR157W 2610 nt3.09□□□□□ -1.91
PEX28P38848 PRP6YBR055C 2700 nt3.09□□□□□ -1.91
PEX28P38848 YDL007C-AYDL007C-A 258 nt3.09□□□□□ -1.91
PEX28P38848 YDR426CYDR426C 378 nt3.09□□□□□ -1.91
PEX28P38848 TRX1YLR043C 312 nt3.09□□□□□ -1.91
PEX28P38848 YLR342W-AYLR342W-A 174 nt3.09□□□□□ -1.91
PEX28P38848 YOR170WYOR170W 306 nt3.09□□□□□ -1.91
PEX28P38848 YBR224WYBR224W 516 nt3.09□□□□□ -1.91
PEX28P38848 CIN8YEL061C 3003 nt3.09□□□□□ -1.92
PEX28P38848 snR70snR70 164 nt3.08□□□□□ -1.92
PEX28P38848 YRB1YDR002W 606 nt3.08□□□□□ -1.92
PEX28P38848 tF(GAA)QtF(GAA)Q 75 nt3.08□□□□□ -1.92
PEX28P38848 YLR255CYLR255C 354 nt3.08□□□□□ -1.92
PEX28P38848 YOR333CYOR333C 417 nt3.08□□□□□ -1.92
PEX28P38848 PEX8YGR077C 1770 nt3.07□□□□□ -1.92
PEX28P38848 SPO14YKR031C 5052 nt3.07□□□□□ -1.92
PEX28P38848 LCD1YDR499W 2244 nt3.07□□□□□ -1.92
PEX28P38848 HRD3YLR207W 2502 nt3.07□□□□□ -1.92
PEX28P38848 tQ(UUG)BtQ(UUG)B 72 nt3.07□□□□□ -1.92
PEX28P38848 VPS55YJR044C 423 nt3.07□□□□□ -1.92
PEX28P38848 CSE2YNR010W 450 nt3.07□□□□□ -1.92
PEX28P38848 DBP7YKR024C 2229 nt3.07□□□□□ -1.92
PEX28P38848 FMP16YDR070C 282 nt3.06□□□□□ -1.92
PEX28P38848 USE1YGL098W 738 nt3.06□□□□□ -1.92
PEX28P38848 YLR120W-AYLR120W-A 102 nt3.06□□□□□ -1.92
PEX28P38848 UPS1YLR193C 528 nt3.06□□□□□ -1.92
PEX28P38848 GIS2YNL255C 462 nt3.06□□□□□ -1.92
PEX28P38848 MDM20YOL076W 2391 nt3.06□□□□□ -1.92
PEX28P38848 VIK1YPL253C 1944 nt3.05□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 65 ms