Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 AC116050.2-201ENST00000612102 1779 ntBASIC19.28■□□□□ 0.68
PTPN6P29350 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN6P29350 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPN6P29350 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN6P29350 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN6P29350 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN6P29350 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN6P29350 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN6P29350 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN6P29350 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.27■□□□□ 0.68
PTPN6P29350 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN6P29350 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN6P29350 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN6P29350 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN6P29350 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN6P29350 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.27■□□□□ 0.67
PTPN6P29350 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN6P29350 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN6P29350 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN6P29350 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTPN6P29350 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN6P29350 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN6P29350 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN6P29350 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 KRT18P11-201ENST00000435214 1283 ntBASIC19.26■□□□□ 0.67
PTPN6P29350 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN6P29350 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN6P29350 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN6P29350 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN6P29350 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN6P29350 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN6P29350 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.25■□□□□ 0.67
PTPN6P29350 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN6P29350 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN6P29350 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.25■□□□□ 0.67
PTPN6P29350 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN6P29350 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN6P29350 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN6P29350 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTPN6P29350 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN6P29350 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN6P29350 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN6P29350 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTPN6P29350 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPN6P29350 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN6P29350 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN6P29350 AC120498.10-201ENST00000621827 505 ntBASIC19.24■□□□□ 0.67
PTPN6P29350 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTPN6P29350 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 SMG8-203ENST00000578922 2178 ntBASIC19.24■□□□□ 0.67
PTPN6P29350 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN6P29350 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN6P29350 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PTPN6P29350 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms