Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMP1P11279 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LAMP1P11279 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 TCF3P1-201ENST00000423021 1937 ntBASIC19.24■□□□□ 0.67
LAMP1P11279 AC097381.1-201ENST00000429019 1296 ntBASIC19.24■□□□□ 0.67
LAMP1P11279 AC034268.1-201ENST00000441047 882 ntBASIC19.24■□□□□ 0.67
LAMP1P11279 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LAMP1P11279 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
LAMP1P11279 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LAMP1P11279 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMP1P11279 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMP1P11279 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LAMP1P11279 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LAMP1P11279 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 CDV3P1-201ENST00000471403 739 ntBASIC19.23■□□□□ 0.67
LAMP1P11279 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMP1P11279 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.23■□□□□ 0.67
LAMP1P11279 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMP1P11279 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.23■□□□□ 0.67
LAMP1P11279 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMP1P11279 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LAMP1P11279 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMP1P11279 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LAMP1P11279 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
LAMP1P11279 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
LAMP1P11279 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.22■□□□□ 0.67
LAMP1P11279 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.22■□□□□ 0.67
LAMP1P11279 AC087623.3-201ENST00000607047 1098 ntBASIC19.22■□□□□ 0.67
LAMP1P11279 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LAMP1P11279 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
LAMP1P11279 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.22■□□□□ 0.67
LAMP1P11279 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMP1P11279 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
LAMP1P11279 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
LAMP1P11279 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMP1P11279 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMP1P11279 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.21■□□□□ 0.67
LAMP1P11279 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMP1P11279 TERF1P5-201ENST00000477545 1207 ntBASIC19.21■□□□□ 0.67
LAMP1P11279 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMP1P11279 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMP1P11279 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.21■□□□□ 0.67
LAMP1P11279 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 FAM21FP-204ENST00000608637 956 ntBASIC19.21■□□□□ 0.67
LAMP1P11279 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 MIR6821-201ENST00000617625 74 ntBASIC19.21■□□□□ 0.67
LAMP1P11279 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMP1P11279 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMP1P11279 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMP1P11279 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
LAMP1P11279 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms