Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRCH4O75427 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRCH4O75427 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
LRCH4O75427 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 AC004911.1-201ENST00000416316 871 ntBASIC21.18■□□□□ 0.98
LRCH4O75427 PGM5P4-201ENST00000421970 445 ntBASIC21.18■□□□□ 0.98
LRCH4O75427 AC007322.1-201ENST00000426983 750 ntBASIC21.18■□□□□ 0.98
LRCH4O75427 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.18■□□□□ 0.98
LRCH4O75427 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.18■□□□□ 0.98
LRCH4O75427 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.18■□□□□ 0.98
LRCH4O75427 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRCH4O75427 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LRCH4O75427 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRCH4O75427 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.17■□□□□ 0.98
LRCH4O75427 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH4O75427 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH4O75427 AC100791.3-201ENST00000617619 330 ntBASIC21.17■□□□□ 0.98
LRCH4O75427 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LRCH4O75427 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH4O75427 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH4O75427 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRCH4O75427 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH4O75427 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
LRCH4O75427 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 PCDHAC2-203ENST00000615316 3011 ntBASIC21.16■□□□□ 0.98
LRCH4O75427 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH4O75427 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH4O75427 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 DPP3P2-201ENST00000416030 1696 ntBASIC21.15■□□□□ 0.98
LRCH4O75427 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.15■□□□□ 0.98
LRCH4O75427 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
LRCH4O75427 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LRCH4O75427 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 MCRIP2P1-201ENST00000394346 511 ntBASIC21.15■□□□□ 0.98
LRCH4O75427 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.15■□□□□ 0.98
LRCH4O75427 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LRCH4O75427 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH4O75427 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.15■□□□□ 0.98
LRCH4O75427 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRCH4O75427 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.14■□□□□ 0.98
LRCH4O75427 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRCH4O75427 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH4O75427 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH4O75427 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms