Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXN1O15353 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.33■■□□□ 1.49
FOXN1O15353 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.33■■□□□ 1.49
FOXN1O15353 AL589743.5-201ENST00000616611 1050 ntBASIC24.33■■□□□ 1.49
FOXN1O15353 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
FOXN1O15353 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FOXN1O15353 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.33■■□□□ 1.49
FOXN1O15353 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXN1O15353 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
FOXN1O15353 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.32■■□□□ 1.48
FOXN1O15353 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXN1O15353 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXN1O15353 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
FOXN1O15353 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.32■■□□□ 1.48
FOXN1O15353 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
FOXN1O15353 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
FOXN1O15353 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
FOXN1O15353 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXN1O15353 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXN1O15353 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.31■■□□□ 1.48
FOXN1O15353 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.31■■□□□ 1.48
FOXN1O15353 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
FOXN1O15353 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.31■■□□□ 1.48
FOXN1O15353 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.31■■□□□ 1.48
FOXN1O15353 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXN1O15353 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
FOXN1O15353 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXN1O15353 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
FOXN1O15353 TERF1P1-201ENST00000311003 1181 ntBASIC24.3■■□□□ 1.48
FOXN1O15353 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
FOXN1O15353 KRASP1-201ENST00000407852 552 ntBASIC24.3■■□□□ 1.48
FOXN1O15353 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.3■■□□□ 1.48
FOXN1O15353 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.3■■□□□ 1.48
FOXN1O15353 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.3■■□□□ 1.48
FOXN1O15353 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
FOXN1O15353 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
FOXN1O15353 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
FOXN1O15353 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
FOXN1O15353 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.29■■□□□ 1.48
FOXN1O15353 AC104076.2-201ENST00000448912 469 ntBASIC24.29■■□□□ 1.48
FOXN1O15353 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 KRT18P56-201ENST00000507275 550 ntBASIC24.29■■□□□ 1.48
FOXN1O15353 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.29■■□□□ 1.48
FOXN1O15353 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.29■■□□□ 1.48
FOXN1O15353 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.29■■□□□ 1.48
FOXN1O15353 AC100791.3-201ENST00000617619 330 ntBASIC24.29■■□□□ 1.48
FOXN1O15353 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.29■■□□□ 1.48
FOXN1O15353 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.29■■□□□ 1.48
FOXN1O15353 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXN1O15353 KRT8P9-201ENST00000558927 1449 ntBASIC24.28■■□□□ 1.48
FOXN1O15353 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.28■■□□□ 1.48
FOXN1O15353 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.28■■□□□ 1.48
FOXN1O15353 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
FOXN1O15353 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.28■■□□□ 1.48
FOXN1O15353 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
FOXN1O15353 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
FOXN1O15353 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.28■■□□□ 1.48
FOXN1O15353 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.28■■□□□ 1.48
FOXN1O15353 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
FOXN1O15353 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXN1O15353 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FOXN1O15353 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
FOXN1O15353 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXN1O15353 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXN1O15353 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FOXN1O15353 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.27■■□□□ 1.48
FOXN1O15353 AC079089.2-201ENST00000531211 1277 ntBASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms