Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ATP2A1O14983 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP2A1O14983 AL390719.1-204ENST00000412397 1219 ntBASIC23.34■■□□□ 1.33
ATP2A1O14983 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ATP2A1O14983 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.34■■□□□ 1.33
ATP2A1O14983 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ATP2A1O14983 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP2A1O14983 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.34■■□□□ 1.33
ATP2A1O14983 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATP2A1O14983 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.34■■□□□ 1.33
ATP2A1O14983 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.34■■□□□ 1.33
ATP2A1O14983 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
ATP2A1O14983 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP2A1O14983 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
ATP2A1O14983 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.33■■□□□ 1.33
ATP2A1O14983 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.33■■□□□ 1.33
ATP2A1O14983 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.33■■□□□ 1.33
ATP2A1O14983 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ATP2A1O14983 AC124016.1-201ENST00000609552 612 ntBASIC23.33■■□□□ 1.33
ATP2A1O14983 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ATP2A1O14983 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATP2A1O14983 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
ATP2A1O14983 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 KRT8P36-201ENST00000489121 1440 ntBASIC23.33■■□□□ 1.32
ATP2A1O14983 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATP2A1O14983 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP2A1O14983 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ATP2A1O14983 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP2A1O14983 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.32■■□□□ 1.32
ATP2A1O14983 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.32■■□□□ 1.32
ATP2A1O14983 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATP2A1O14983 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP2A1O14983 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
ATP2A1O14983 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.32■■□□□ 1.32
ATP2A1O14983 MIR4497-201ENST00000583208 89 ntBASIC23.32■■□□□ 1.32
ATP2A1O14983 MIR2861-201ENST00000636310 90 ntBASIC23.32■■□□□ 1.32
ATP2A1O14983 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATP2A1O14983 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATP2A1O14983 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP2A1O14983 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP2A1O14983 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP2A1O14983 AC023632.3-201ENST00000521633 145 ntBASIC23.31■■□□□ 1.32
ATP2A1O14983 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
ATP2A1O14983 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ATP2A1O14983 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.31■■□□□ 1.32
ATP2A1O14983 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATP2A1O14983 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ATP2A1O14983 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.3■■□□□ 1.32
ATP2A1O14983 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.3■■□□□ 1.32
ATP2A1O14983 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATP2A1O14983 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ATP2A1O14983 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.29■■□□□ 1.32
ATP2A1O14983 AC012618.2-201ENST00000428058 849 ntBASIC23.29■■□□□ 1.32
ATP2A1O14983 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP2A1O14983 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP2A1O14983 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.29■■□□□ 1.32
ATP2A1O14983 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 AL023875.1-201ENST00000640777 796 ntBASIC23.29■■□□□ 1.32
ATP2A1O14983 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATP2A1O14983 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms