Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
UBFD1O14562 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
UBFD1O14562 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
UBFD1O14562 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.72■□□□□ 0.75
UBFD1O14562 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.72■□□□□ 0.75
UBFD1O14562 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UBFD1O14562 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
UBFD1O14562 DPP3P2-201ENST00000416030 1696 ntBASIC19.71■□□□□ 0.75
UBFD1O14562 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.71■□□□□ 0.75
UBFD1O14562 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBFD1O14562 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.71■□□□□ 0.75
UBFD1O14562 ZNRF2P3-201ENST00000424200 374 ntBASIC19.71■□□□□ 0.75
UBFD1O14562 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
UBFD1O14562 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.71■□□□□ 0.75
UBFD1O14562 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.71■□□□□ 0.75
UBFD1O14562 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.71■□□□□ 0.75
UBFD1O14562 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBFD1O14562 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UBFD1O14562 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBFD1O14562 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
UBFD1O14562 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
UBFD1O14562 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.7■□□□□ 0.74
UBFD1O14562 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
UBFD1O14562 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.7■□□□□ 0.74
UBFD1O14562 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBFD1O14562 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 AL691432.2-201ENST00000607222 2038 ntBASIC19.69■□□□□ 0.74
UBFD1O14562 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
UBFD1O14562 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBFD1O14562 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.69■□□□□ 0.74
UBFD1O14562 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
UBFD1O14562 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.68■□□□□ 0.74
UBFD1O14562 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
UBFD1O14562 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
UBFD1O14562 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBFD1O14562 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms