Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.16■□□□□ 0.82
TLR4O00206 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 FBXW4P1-201ENST00000426721 2239 ntBASIC20.16■□□□□ 0.82
TLR4O00206 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TLR4O00206 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TLR4O00206 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.15■□□□□ 0.82
TLR4O00206 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.15■□□□□ 0.82
TLR4O00206 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.15■□□□□ 0.82
TLR4O00206 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TLR4O00206 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TLR4O00206 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.15■□□□□ 0.82
TLR4O00206 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.15■□□□□ 0.82
TLR4O00206 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TLR4O00206 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.15■□□□□ 0.82
TLR4O00206 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TLR4O00206 AL024507.2-201ENST00000606070 2574 ntBASIC20.15■□□□□ 0.82
TLR4O00206 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TLR4O00206 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
TLR4O00206 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TLR4O00206 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR4O00206 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TLR4O00206 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TLR4O00206 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.14■□□□□ 0.81
TLR4O00206 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TLR4O00206 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.14■□□□□ 0.81
TLR4O00206 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.14■□□□□ 0.81
TLR4O00206 Z99916.2-201ENST00000604037 246 ntBASIC20.14■□□□□ 0.81
TLR4O00206 AL356652.1-201ENST00000615962 565 ntBASIC20.14■□□□□ 0.81
TLR4O00206 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
TLR4O00206 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.14■□□□□ 0.81
TLR4O00206 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.14■□□□□ 0.81
TLR4O00206 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TLR4O00206 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR4O00206 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.13■□□□□ 0.81
TLR4O00206 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR4O00206 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.13■□□□□ 0.81
TLR4O00206 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.13■□□□□ 0.81
TLR4O00206 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 AC005829.2-201ENST00000571422 1056 ntBASIC20.13■□□□□ 0.81
TLR4O00206 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.13■□□□□ 0.81
TLR4O00206 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.13■□□□□ 0.81
TLR4O00206 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TLR4O00206 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TLR4O00206 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TLR4O00206 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TLR4O00206 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR4O00206 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.12■□□□□ 0.81
TLR4O00206 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.12■□□□□ 0.81
TLR4O00206 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 MIR4497-201ENST00000583208 89 ntBASIC20.12■□□□□ 0.81
TLR4O00206 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 AC120498.8-201ENST00000614275 531 ntBASIC20.12■□□□□ 0.81
TLR4O00206 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.12■□□□□ 0.81
TLR4O00206 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TLR4O00206 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TLR4O00206 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR4O00206 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.11■□□□□ 0.81
TLR4O00206 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR4O00206 MTDHP1-201ENST00000605323 784 ntBASIC20.11■□□□□ 0.81
TLR4O00206 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TLR4O00206 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms