Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 POM121L13P-201ENST00000422362 380 ntBASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 AP006294.2-201ENST00000641667 209 ntBASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.39■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
C1QTNF3-AMACRE9PGA6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC079834.2-201ENST00000609776 1949 ntBASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC093827.2-201ENST00000512654 315 ntBASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC069544.1-201ENST00000609399 999 ntBASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 LINC00565-201ENST00000562710 2331 ntBASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 AC006557.6-201ENST00000623071 864 ntBASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C1QTNF3-AMACRE9PGA6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms