Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 AC117947.1-201ENST00000427448 529 ntBASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 AC091390.4-202ENST00000476426 537 ntBASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 AC092053.2-201ENST00000640557 1818 ntBASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TMEM88BA6NKF7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 TSPY14P-201ENST00000303979 915 ntBASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 NIFKP9-201ENST00000419265 221 ntBASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.9■■□□□ 1.42
TMEM88BA6NKF7 AC124283.5-201ENST00000624661 1809 ntBASIC23.89■■□□□ 1.42
TMEM88BA6NKF7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.89■■□□□ 1.42
TMEM88BA6NKF7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
TMEM88BA6NKF7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TMEM88BA6NKF7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TMEM88BA6NKF7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 RNF152P1-201ENST00000397754 604 ntBASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 AC128688.1-201ENST00000487626 519 ntBASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 AL121906.2-201ENST00000621597 723 ntBASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMEM88BA6NKF7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 PCED1CP-201ENST00000419887 785 ntBASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 AC093458.2-201ENST00000623150 629 ntBASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMEM88BA6NKF7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 AL691432.3-201ENST00000621860 400 ntBASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms