Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 AL137784.2-201ENST00000607332 1000 ntBASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC162PA2VCL2 AL512408.1-201ENST00000569378 2000 ntBASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 AC087633.2-202ENST00000565166 1439 ntBASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC162PA2VCL2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 AC073111.5-205ENST00000641717 521 ntBASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC162PA2VCL2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 AL356652.1-201ENST00000615962 565 ntBASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC162PA2VCL2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 AL162377.1-201ENST00000618844 1793 ntBASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 CDCA4P2-201ENST00000441182 718 ntBASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 AC005181.1-201ENST00000604782 1256 ntBASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC162PA2VCL2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms