Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 AC007322.3-201ENST00000426526 701 ntBASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 UBE2DNL-204ENST00000602536 740 ntBASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.39■□□□□ 0.54
TRAV27A0A087WT01 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.39■□□□□ 0.54
TRAV27A0A087WT01 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV27A0A087WT01 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 KRT19P1-201ENST00000405746 1186 ntBASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 SLC7A5P1-201ENST00000568957 537 ntBASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV27A0A087WT01 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV27A0A087WT01 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 TCF3P1-201ENST00000423021 1937 ntBASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV27A0A087WT01 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV27A0A087WT01 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV27A0A087WT01 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms