Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 AC011484.1-201ENST00000377652 1995 ntBASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
CTDP1Q9Y5B0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 POM121L13P-201ENST00000422362 380 ntBASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 RPPH1-201ENST00000516869 333 ntBASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 Z98882.1-201ENST00000622160 2253 ntBASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 AC012676.1-201ENST00000574705 1949 ntBASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CTDP1Q9Y5B0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 RN7SL471P-201ENST00000580476 299 ntBASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 AC069544.1-201ENST00000609399 999 ntBASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CTDP1Q9Y5B0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CTDP1Q9Y5B0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 AC006557.6-201ENST00000623071 864 ntBASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CTDP1Q9Y5B0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms