Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 AC099791.1-201ENST00000416440 715 ntBASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 AC018445.3-201ENST00000624177 1945 ntBASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D4Q9Y2X8 AC135279.3-201ENST00000610945 1311 ntBASIC14.15□□□□□ -0.15
UBE2D4Q9Y2X8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 RARRES2P11-201ENST00000635158 484 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 MIR2861-201ENST00000636310 90 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 AC138932.1-201ENST00000534164 6830 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 AC125437.2-201ENST00000625180 2167 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 BX323043.1-201ENST00000641006 1765 ntBASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBE2D4Q9Y2X8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 MIR572-201ENST00000384983 95 ntBASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 AC027682.1-201ENST00000562846 899 ntBASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D4Q9Y2X8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 AL158211.5-201ENST00000623583 2518 ntBASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 AC245052.3-201ENST00000450182 901 ntBASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms