Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 HLA-B-256ENST00000639848 1089 ntBASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.26■■□□□ 1.79
PDZRN3Q9UPQ7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.25■■□□□ 1.79
PDZRN3Q9UPQ7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 FAM21FP-204ENST00000608637 956 ntBASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDZRN3Q9UPQ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 AC008403.3-201ENST00000598924 454 ntBASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDZRN3Q9UPQ7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 SLC25A24-204ENST00000569674 2357 ntBASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDZRN3Q9UPQ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDZRN3Q9UPQ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDZRN3Q9UPQ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PDZRN3Q9UPQ7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms