Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 MIPEPP3-201ENST00000412105 444 ntBASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 BX276092.2-201ENST00000417668 665 ntBASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 AL589743.5-201ENST00000616611 1050 ntBASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 AL109923.1-201ENST00000618799 583 ntBASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ECHDC1Q9NTX5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 SLC29A4P1-201ENST00000398760 971 ntBASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 AC104771.1-201ENST00000603335 964 ntBASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 AC092720.2-201ENST00000602388 1665 ntBASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 AC020907.5-201ENST00000624372 1936 ntBASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ECHDC1Q9NTX5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.83■■□□□ 1.57
ECHDC1Q9NTX5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 LSM12P1-201ENST00000411836 588 ntBASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 GABARAPL3-202ENST00000624044 1851 ntBASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.82■■□□□ 1.56
ECHDC1Q9NTX5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 AC092667.1-201ENST00000434301 2586 ntBASIC24.81■■□□□ 1.56
ECHDC1Q9NTX5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 HLA-L-209ENST00000420110 1011 ntBASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 AC092118.2-201ENST00000613495 667 ntBASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 LINC01006-201ENST00000333319 2292 ntBASIC24.8■■□□□ 1.56
ECHDC1Q9NTX5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms