Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOMER3Q9NSC5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 PCDHAC2-203ENST00000615316 3011 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 AC027612.3-201ENST00000413684 1047 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L2-201ENST00000561772 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 AL139246.5-201ENST00000606645 996 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 MIR6084-201ENST00000622012 110 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L6-201ENST00000626483 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L1-201ENST00000627662 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L8-201ENST00000629013 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L3-201ENST00000630187 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L7-201ENST00000630678 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 DUX4L5-201ENST00000630834 1275 ntBASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOMER3Q9NSC5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOMER3Q9NSC5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOMER3Q9NSC5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOMER3Q9NSC5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
HOMER3Q9NSC5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
HOMER3Q9NSC5 AC112907.3-201ENST00000577781 2400 ntBASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 AC142381.2-201ENST00000566120 298 ntBASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.14■□□□□ 0.97
HOMER3Q9NSC5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 KRT18P20-201ENST00000548986 1279 ntBASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOMER3Q9NSC5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 LINC02228-203ENST00000641970 1355 ntBASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 TCF3P1-201ENST00000423021 1937 ntBASIC21.12■□□□□ 0.97
HOMER3Q9NSC5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms