Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNCQ9H7C4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SYNCQ9H7C4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNCQ9H7C4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYNCQ9H7C4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNCQ9H7C4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SYNCQ9H7C4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 AL162412.1-201ENST00000567129 965 ntBASIC21.64■■□□□ 1.05
SYNCQ9H7C4 FAM21FP-204ENST00000608637 956 ntBASIC21.64■■□□□ 1.05
SYNCQ9H7C4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNCQ9H7C4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
SYNCQ9H7C4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNCQ9H7C4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 AC073130.3-201ENST00000624389 2278 ntBASIC21.62■■□□□ 1.05
SYNCQ9H7C4 AL157384.1-201ENST00000445995 2473 ntBASIC21.62■■□□□ 1.05
SYNCQ9H7C4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 AC016405.3-201ENST00000607710 860 ntBASIC21.62■■□□□ 1.05
SYNCQ9H7C4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 AC068338.2-201ENST00000563278 1430 ntBASIC21.62■■□□□ 1.05
SYNCQ9H7C4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNCQ9H7C4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 AC069236.1-201ENST00000604339 616 ntBASIC21.61■■□□□ 1.05
SYNCQ9H7C4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNCQ9H7C4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms