Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 AC087623.3-201ENST00000607047 1098 ntBASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 NTF6G-201ENST00000591094 616 ntBASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 MYCNOS-205ENST00000641950 531 ntBASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO3Q9BXY4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 AL691432.2-201ENST00000607222 2038 ntBASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 AC097381.1-201ENST00000429019 1296 ntBASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.74■□□□□ 0.59
RSPO3Q9BXY4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.73■□□□□ 0.59
RSPO3Q9BXY4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 DPP3P2-201ENST00000416030 1696 ntBASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RSPO3Q9BXY4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms