Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AC005829.2-201ENST00000571422 1056 ntBASIC18.03■□□□□ 0.48
PCNX1Q96RV3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 AC110285.5-201ENST00000611501 352 ntBASIC18.02■□□□□ 0.48
PCNX1Q96RV3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX1Q96RV3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.02■□□□□ 0.47
PCNX1Q96RV3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 AP003071.4-201ENST00000562276 1284 ntBASIC18.01■□□□□ 0.47
PCNX1Q96RV3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 KRT8P9-201ENST00000558927 1449 ntBASIC18.01■□□□□ 0.47
PCNX1Q96RV3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX1Q96RV3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18■□□□□ 0.47
PCNX1Q96RV3 CYP21A1P-202ENST00000354927 1481 ntBASIC18■□□□□ 0.47
PCNX1Q96RV3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18■□□□□ 0.47
PCNX1Q96RV3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18■□□□□ 0.47
PCNX1Q96RV3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCNX1Q96RV3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18■□□□□ 0.47
PCNX1Q96RV3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18■□□□□ 0.47
PCNX1Q96RV3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18■□□□□ 0.47
PCNX1Q96RV3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18■□□□□ 0.47
PCNX1Q96RV3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18■□□□□ 0.47
PCNX1Q96RV3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18■□□□□ 0.47
PCNX1Q96RV3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18■□□□□ 0.47
PCNX1Q96RV3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX1Q96RV3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX1Q96RV3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 AIRN-201ENST00000601203 4374 ntBASIC17.98■□□□□ 0.47
PCNX1Q96RV3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.98■□□□□ 0.47
PCNX1Q96RV3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 AC113410.3-201ENST00000623366 203 ntBASIC17.98■□□□□ 0.47
PCNX1Q96RV3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX1Q96RV3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms