Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 KRT18P29-201ENST00000397031 1267 ntBASIC15.82■□□□□ 0.12
DUX3Q96PT4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 ESRRAP1-201ENST00000400596 1257 ntBASIC15.82■□□□□ 0.12
DUX3Q96PT4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 AC100791.3-201ENST00000617619 330 ntBASIC15.82■□□□□ 0.12
DUX3Q96PT4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DUX3Q96PT4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DUX3Q96PT4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.81■□□□□ 0.12
DUX3Q96PT4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
DUX3Q96PT4 AL024507.2-201ENST00000606070 2574 ntBASIC15.81■□□□□ 0.12
DUX3Q96PT4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DUX3Q96PT4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.8■□□□□ 0.12
DUX3Q96PT4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 AC008687.6-201ENST00000596318 630 ntBASIC15.8■□□□□ 0.12
DUX3Q96PT4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUX3Q96PT4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DUX3Q96PT4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUX3Q96PT4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.79■□□□□ 0.12
DUX3Q96PT4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms