Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 AC105020.6-201ENST00000621523 1217 ntBASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 AC233263.1-201ENST00000578059 224 ntBASIC16.56■□□□□ 0.24
ZNF48Q96MX3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF48Q96MX3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 SOX15-203ENST00000570788 1093 ntBASIC16.55■□□□□ 0.24
ZNF48Q96MX3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF48Q96MX3 FEM1AP4-201ENST00000443167 1987 ntBASIC16.55■□□□□ 0.24
ZNF48Q96MX3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 UBE2SP1-201ENST00000450587 669 ntBASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.54■□□□□ 0.24
ZNF48Q96MX3 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC008550.1-201ENST00000511500 884 ntBASIC16.54■□□□□ 0.24
ZNF48Q96MX3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 RPPH1-201ENST00000516869 333 ntBASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms