Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 PRORSD1P-201ENST00000295112 541 ntBASIC18.27■□□□□ 0.52
LRRC46Q96FV0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 MCRIP2P1-201ENST00000394346 511 ntBASIC18.27■□□□□ 0.52
LRRC46Q96FV0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.27■□□□□ 0.52
LRRC46Q96FV0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 AC026366.1-201ENST00000488803 879 ntBASIC18.27■□□□□ 0.52
LRRC46Q96FV0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC46Q96FV0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC46Q96FV0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LRRC46Q96FV0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC46Q96FV0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 AP003097.1-201ENST00000530657 1135 ntBASIC18.26■□□□□ 0.51
LRRC46Q96FV0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC46Q96FV0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 AC091799.1-201ENST00000422823 811 ntBASIC18.25■□□□□ 0.51
LRRC46Q96FV0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 UNC93B5-201ENST00000530315 699 ntBASIC18.25■□□□□ 0.51
LRRC46Q96FV0 AC142381.4-202ENST00000563973 229 ntBASIC18.25■□□□□ 0.51
LRRC46Q96FV0 CYP2T3P-201ENST00000601990 817 ntBASIC18.25■□□□□ 0.51
LRRC46Q96FV0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC46Q96FV0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 AC007322.3-201ENST00000426526 701 ntBASIC18.24■□□□□ 0.51
LRRC46Q96FV0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC46Q96FV0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms