Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC39Q96DD0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC39Q96DD0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC39Q96DD0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC39Q96DD0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC39Q96DD0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC39Q96DD0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC39Q96DD0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 AC019069.1-201ENST00000610008 1333 ntBASIC20.53■□□□□ 0.88
LRRC39Q96DD0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 MIR638-201ENST00000385237 100 ntBASIC20.53■□□□□ 0.88
LRRC39Q96DD0 KRT18P14-201ENST00000534205 1250 ntBASIC20.53■□□□□ 0.88
LRRC39Q96DD0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC39Q96DD0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 CDV3P1-201ENST00000471403 739 ntBASIC20.52■□□□□ 0.88
LRRC39Q96DD0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC39Q96DD0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC39Q96DD0 AC004854.2-201ENST00000608450 1441 ntBASIC20.52■□□□□ 0.87
LRRC39Q96DD0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC39Q96DD0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC39Q96DD0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC39Q96DD0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms