Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 AP005212.1-201ENST00000581547 1997 ntBASIC26.21■■□□□ 1.79
ZNF428Q96B54 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 POU5F1P3-201ENST00000428824 1078 ntBASIC26.21■■□□□ 1.79
ZNF428Q96B54 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ZNF428Q96B54 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZNF428Q96B54 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.2■■□□□ 1.79
ZNF428Q96B54 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
ZNF428Q96B54 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZNF428Q96B54 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ZNF428Q96B54 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
ZNF428Q96B54 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
ZNF428Q96B54 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.2■■□□□ 1.78
ZNF428Q96B54 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.2■■□□□ 1.78
ZNF428Q96B54 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.2■■□□□ 1.78
ZNF428Q96B54 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
ZNF428Q96B54 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
ZNF428Q96B54 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.19■■□□□ 1.78
ZNF428Q96B54 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ZNF428Q96B54 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ZNF428Q96B54 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.19■■□□□ 1.78
ZNF428Q96B54 KRT18P68-201ENST00000392293 1000 ntBASIC26.19■■□□□ 1.78
ZNF428Q96B54 AC097658.1-201ENST00000475555 843 ntBASIC26.19■■□□□ 1.78
ZNF428Q96B54 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ZNF428Q96B54 GABARAPL3-202ENST00000624044 1851 ntBASIC26.19■■□□□ 1.78
ZNF428Q96B54 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
ZNF428Q96B54 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ZNF428Q96B54 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 PRORSD1P-201ENST00000295112 541 ntBASIC26.18■■□□□ 1.78
ZNF428Q96B54 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.18■■□□□ 1.78
ZNF428Q96B54 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ZNF428Q96B54 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 LSM12P1-201ENST00000411836 588 ntBASIC26.17■■□□□ 1.78
ZNF428Q96B54 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.17■■□□□ 1.78
ZNF428Q96B54 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.17■■□□□ 1.78
ZNF428Q96B54 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ZNF428Q96B54 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.17■■□□□ 1.78
ZNF428Q96B54 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ZNF428Q96B54 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 AC105020.6-201ENST00000621523 1217 ntBASIC26.16■■□□□ 1.78
ZNF428Q96B54 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZNF428Q96B54 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.16■■□□□ 1.78
ZNF428Q96B54 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
ZNF428Q96B54 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.15■■□□□ 1.78
ZNF428Q96B54 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF428Q96B54 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms