Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 CYP21A1P-202ENST00000354927 1481 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 AC073314.1-201ENST00000568729 2216 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 AC005181.1-201ENST00000604782 1256 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 OR10C1-204ENST00000622521 1039 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 AC073111.5-205ENST00000641717 521 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 KRT8P36-201ENST00000489121 1440 ntBASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
APOBEC3DQ96AK3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 AC020907.5-201ENST00000624372 1936 ntBASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 AL157384.1-201ENST00000445995 2473 ntBASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
APOBEC3DQ96AK3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 AL356652.1-201ENST00000615962 565 ntBASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
APOBEC3DQ96AK3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 LINC01006-201ENST00000333319 2292 ntBASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 AC026185.1-201ENST00000445748 174 ntBASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
APOBEC3DQ96AK3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 CDCA4P2-201ENST00000441182 718 ntBASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APOBEC3DQ96AK3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms