Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP9XQ93008 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP9XQ93008 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.91■□□□□ 0.46
USP9XQ93008 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.91■□□□□ 0.46
USP9XQ93008 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.91■□□□□ 0.46
USP9XQ93008 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.91■□□□□ 0.46
USP9XQ93008 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.91■□□□□ 0.46
USP9XQ93008 C2orf69P3-201ENST00000565542 1120 ntBASIC17.91■□□□□ 0.46
USP9XQ93008 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.91■□□□□ 0.46
USP9XQ93008 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP9XQ93008 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.91■□□□□ 0.46
USP9XQ93008 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.91■□□□□ 0.46
USP9XQ93008 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.91■□□□□ 0.46
USP9XQ93008 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP9XQ93008 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP9XQ93008 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP9XQ93008 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.9■□□□□ 0.46
USP9XQ93008 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP9XQ93008 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.9■□□□□ 0.46
USP9XQ93008 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP9XQ93008 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP9XQ93008 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.9■□□□□ 0.46
USP9XQ93008 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
USP9XQ93008 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.9■□□□□ 0.46
USP9XQ93008 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.9■□□□□ 0.46
USP9XQ93008 BX664615.1-201ENST00000443558 458 ntBASIC17.9■□□□□ 0.46
USP9XQ93008 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.9■□□□□ 0.46
USP9XQ93008 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
USP9XQ93008 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.9■□□□□ 0.46
USP9XQ93008 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP9XQ93008 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP9XQ93008 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.9■□□□□ 0.46
USP9XQ93008 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP9XQ93008 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP9XQ93008 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.89■□□□□ 0.46
USP9XQ93008 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
USP9XQ93008 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP9XQ93008 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.89■□□□□ 0.46
USP9XQ93008 AC026271.3-201ENST00000571884 352 ntBASIC17.89■□□□□ 0.46
USP9XQ93008 FAM87A-204ENST00000613235 858 ntBASIC17.89■□□□□ 0.46
USP9XQ93008 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP9XQ93008 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.89■□□□□ 0.45
USP9XQ93008 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.89■□□□□ 0.45
USP9XQ93008 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
USP9XQ93008 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.89■□□□□ 0.45
USP9XQ93008 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP9XQ93008 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.88■□□□□ 0.45
USP9XQ93008 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.88■□□□□ 0.45
USP9XQ93008 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.88■□□□□ 0.45
USP9XQ93008 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 AC068473.5-201ENST00000616428 2072 ntBASIC17.88■□□□□ 0.45
USP9XQ93008 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.88■□□□□ 0.45
USP9XQ93008 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP9XQ93008 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP9XQ93008 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.87■□□□□ 0.45
USP9XQ93008 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.87■□□□□ 0.45
USP9XQ93008 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP9XQ93008 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP9XQ93008 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
USP9XQ93008 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP9XQ93008 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms