Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HPS1Q92902 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HPS1Q92902 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.47■□□□□ 0.55
HPS1Q92902 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.47■□□□□ 0.55
HPS1Q92902 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.47■□□□□ 0.55
HPS1Q92902 AL031602.1-201ENST00000633169 911 ntBASIC18.47■□□□□ 0.55
HPS1Q92902 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HPS1Q92902 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.47■□□□□ 0.55
HPS1Q92902 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
HPS1Q92902 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPS1Q92902 AL158211.5-201ENST00000623583 2518 ntBASIC18.47■□□□□ 0.55
HPS1Q92902 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HPS1Q92902 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS1Q92902 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.46■□□□□ 0.55
HPS1Q92902 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
HPS1Q92902 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HPS1Q92902 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS1Q92902 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.46■□□□□ 0.55
HPS1Q92902 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HPS1Q92902 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HPS1Q92902 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HPS1Q92902 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HPS1Q92902 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPS1Q92902 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HPS1Q92902 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HPS1Q92902 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.46■□□□□ 0.55
HPS1Q92902 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 AC073314.1-201ENST00000568729 2216 ntBASIC18.45■□□□□ 0.54
HPS1Q92902 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.45■□□□□ 0.54
HPS1Q92902 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS1Q92902 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS1Q92902 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.45■□□□□ 0.54
HPS1Q92902 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
HPS1Q92902 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HPS1Q92902 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS1Q92902 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 FZD10-202ENST00000539839 3282 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.44■□□□□ 0.54
HPS1Q92902 KRT18P5-201ENST00000436075 1291 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 AC010141.3-201ENST00000456659 717 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.44■□□□□ 0.54
HPS1Q92902 AC022517.1-201ENST00000592429 346 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 AL137784.2-201ENST00000607332 1000 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
HPS1Q92902 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
HPS1Q92902 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 AC116562.4-201ENST00000641316 2276 ntBASIC18.44■□□□□ 0.54
HPS1Q92902 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.44■□□□□ 0.54
HPS1Q92902 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS1Q92902 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 LINC02228-203ENST00000641970 1355 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.43■□□□□ 0.54
HPS1Q92902 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.43■□□□□ 0.54
HPS1Q92902 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L2-201ENST00000561772 1275 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms