Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCG3Q8WXD2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SCG3Q8WXD2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCG3Q8WXD2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCG3Q8WXD2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCG3Q8WXD2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 AC013268.1-206ENST00000638368 961 ntBASIC20.76■□□□□ 0.91
SCG3Q8WXD2 AC112229.1-201ENST00000639295 961 ntBASIC20.76■□□□□ 0.91
SCG3Q8WXD2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 KRT16P2-201ENST00000414673 1423 ntBASIC20.76■□□□□ 0.91
SCG3Q8WXD2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCG3Q8WXD2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.75■□□□□ 0.91
SCG3Q8WXD2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SCG3Q8WXD2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 TSPY6P-201ENST00000448518 926 ntBASIC20.73■□□□□ 0.91
SCG3Q8WXD2 AF201337.1-201ENST00000520239 748 ntBASIC20.73■□□□□ 0.91
SCG3Q8WXD2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCG3Q8WXD2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AC061975.6-201ENST00000579045 1553 ntBASIC20.72■□□□□ 0.91
SCG3Q8WXD2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 TERF1P5-201ENST00000477545 1207 ntBASIC20.72■□□□□ 0.91
SCG3Q8WXD2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 AL050303.2-201ENST00000619798 666 ntBASIC20.72■□□□□ 0.91
SCG3Q8WXD2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCG3Q8WXD2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms