Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC104771.1-201ENST00000603335 964 ntBASIC21.59■■□□□ 1.05
UBA3Q8TBC4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 AL356652.1-201ENST00000615962 565 ntBASIC21.59■■□□□ 1.05
UBA3Q8TBC4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBA3Q8TBC4 AL157384.1-201ENST00000445995 2473 ntBASIC21.58■■□□□ 1.05
UBA3Q8TBC4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 SLC29A4P1-201ENST00000398760 971 ntBASIC21.58■■□□□ 1.05
UBA3Q8TBC4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
UBA3Q8TBC4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
UBA3Q8TBC4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
UBA3Q8TBC4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBA3Q8TBC4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
UBA3Q8TBC4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 KRT8P36-201ENST00000489121 1440 ntBASIC21.57■■□□□ 1.04
UBA3Q8TBC4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 ID1-201ENST00000376105 1233 ntBASIC21.57■■□□□ 1.04
UBA3Q8TBC4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBA3Q8TBC4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 AL138781.1-201ENST00000566567 1274 ntBASIC21.56■■□□□ 1.04
UBA3Q8TBC4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.56■■□□□ 1.04
UBA3Q8TBC4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 LSM12P1-201ENST00000411836 588 ntBASIC21.55■■□□□ 1.04
UBA3Q8TBC4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 AC073314.1-201ENST00000568729 2216 ntBASIC21.55■■□□□ 1.04
UBA3Q8TBC4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBA3Q8TBC4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.54■■□□□ 1.04
UBA3Q8TBC4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UBA3Q8TBC4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBA3Q8TBC4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms