Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC32.02■■■□□ 2.72
VPS8Q8N3P4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC32.01■■■□□ 2.72
VPS8Q8N3P4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC32.01■■■□□ 2.71
VPS8Q8N3P4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
VPS8Q8N3P4 AC026366.1-201ENST00000488803 879 ntBASIC32■■■□□ 2.71
VPS8Q8N3P4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC32■■■□□ 2.71
VPS8Q8N3P4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC32■■■□□ 2.71
VPS8Q8N3P4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC32■■■□□ 2.71
VPS8Q8N3P4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS8Q8N3P4 SOX15-203ENST00000570788 1093 ntBASIC32■■■□□ 2.71
VPS8Q8N3P4 ITM2C-210ENST00000620962 501 ntBASIC32■■■□□ 2.71
VPS8Q8N3P4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 AC007225.1-201ENST00000566331 1836 ntBASIC31.99■■■□□ 2.71
VPS8Q8N3P4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
VPS8Q8N3P4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 ESRRAP1-201ENST00000400596 1257 ntBASIC31.98■■■□□ 2.71
VPS8Q8N3P4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS8Q8N3P4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
VPS8Q8N3P4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 FP700111.2-201ENST00000619190 1892 ntBASIC31.96■■■□□ 2.71
VPS8Q8N3P4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
VPS8Q8N3P4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 AC005829.2-201ENST00000571422 1056 ntBASIC31.95■■■□□ 2.71
VPS8Q8N3P4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
VPS8Q8N3P4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.7
VPS8Q8N3P4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
VPS8Q8N3P4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
VPS8Q8N3P4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 AC098590.1-201ENST00000468126 897 ntBASIC31.93■■■□□ 2.7
VPS8Q8N3P4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.93■■■□□ 2.7
VPS8Q8N3P4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms