Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ARHGEF28Q8N1W1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ARHGEF28Q8N1W1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ARHGEF28Q8N1W1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
ARHGEF28Q8N1W1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
ARHGEF28Q8N1W1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 AC120498.8-201ENST00000614275 531 ntBASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 AL023875.1-201ENST00000640777 796 ntBASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC28.45■■■□□ 2.14
ARHGEF28Q8N1W1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 AC233702.5-201ENST00000584107 538 ntBASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
ARHGEF28Q8N1W1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARHGEF28Q8N1W1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 AC124283.5-201ENST00000624661 1809 ntBASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 RPS2P55-201ENST00000397318 883 ntBASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 AC107956.1-201ENST00000494359 873 ntBASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC28.42■■■□□ 2.14
ARHGEF28Q8N1W1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 FBXW4P1-201ENST00000426721 2239 ntBASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 AL049796.1-201ENST00000565336 1766 ntBASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ARHGEF28Q8N1W1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 EP400NL-214ENST00000641289 2402 ntBASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
ARHGEF28Q8N1W1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ARHGEF28Q8N1W1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms