Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 SMG8-203ENST00000578922 2178 ntBASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 TMEM179-206ENST00000616017 1645 ntBASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 AC079140.4-201ENST00000507448 529 ntBASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 AP001330.3-201ENST00000520123 633 ntBASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 AC106739.1-201ENST00000617035 715 ntBASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01561Q8N1V8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01561Q8N1V8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 MIR939-201ENST00000401314 82 ntBASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 AC010141.2-201ENST00000452426 721 ntBASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 PBX2P1-201ENST00000493219 1291 ntBASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 KRT8P36-201ENST00000489121 1440 ntBASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01561Q8N1V8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 KRT18P20-201ENST00000548986 1279 ntBASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms