Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 AC027702.1-201ENST00000563810 1770 ntBASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN4BQ8IWT1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 PNMA6B-201ENST00000538162 1200 ntBASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN4BQ8IWT1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 ITM2C-210ENST00000620962 501 ntBASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCN4BQ8IWT1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 AC026366.1-201ENST00000488803 879 ntBASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 AP003097.1-201ENST00000530657 1135 ntBASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 AC006058.3-201ENST00000606217 1069 ntBASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCN4BQ8IWT1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 MIR2861-201ENST00000636310 90 ntBASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 PLK5-205ENST00000642079 1969 ntBASIC21.47■■□□□ 1.03
SCN4BQ8IWT1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCN4BQ8IWT1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
SCN4BQ8IWT1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.45■■□□□ 1.03
SCN4BQ8IWT1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.45■■□□□ 1.03
SCN4BQ8IWT1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCN4BQ8IWT1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms