Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.07■□□□□ 0.8
APLFQ8IW19 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APLFQ8IW19 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
APLFQ8IW19 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
APLFQ8IW19 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
APLFQ8IW19 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.06■□□□□ 0.8
APLFQ8IW19 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APLFQ8IW19 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.06■□□□□ 0.8
APLFQ8IW19 AC098818.2-201ENST00000564925 2320 ntBASIC20.06■□□□□ 0.8
APLFQ8IW19 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.06■□□□□ 0.8
APLFQ8IW19 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.06■□□□□ 0.8
APLFQ8IW19 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.06■□□□□ 0.8
APLFQ8IW19 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
APLFQ8IW19 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.06■□□□□ 0.8
APLFQ8IW19 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APLFQ8IW19 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.05■□□□□ 0.8
APLFQ8IW19 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.05■□□□□ 0.8
APLFQ8IW19 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.05■□□□□ 0.8
APLFQ8IW19 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.05■□□□□ 0.8
APLFQ8IW19 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.05■□□□□ 0.8
APLFQ8IW19 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.05■□□□□ 0.8
APLFQ8IW19 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
APLFQ8IW19 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APLFQ8IW19 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
APLFQ8IW19 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.04■□□□□ 0.8
APLFQ8IW19 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.04■□□□□ 0.8
APLFQ8IW19 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APLFQ8IW19 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.04■□□□□ 0.8
APLFQ8IW19 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.04■□□□□ 0.8
APLFQ8IW19 AC083906.2-201ENST00000511578 360 ntBASIC20.04■□□□□ 0.8
APLFQ8IW19 DUX4L16-201ENST00000555130 1264 ntBASIC20.04■□□□□ 0.8
APLFQ8IW19 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APLFQ8IW19 TMEM191A-211ENST00000637163 1067 ntBASIC20.04■□□□□ 0.8
APLFQ8IW19 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.04■□□□□ 0.8
APLFQ8IW19 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.04■□□□□ 0.8
APLFQ8IW19 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APLFQ8IW19 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 AC007322.1-201ENST00000426983 750 ntBASIC20.03■□□□□ 0.8
APLFQ8IW19 TSPY6P-201ENST00000448518 926 ntBASIC20.03■□□□□ 0.8
APLFQ8IW19 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 CD99P1-205ENST00000527459 561 ntBASIC20.03■□□□□ 0.8
APLFQ8IW19 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.03■□□□□ 0.8
APLFQ8IW19 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 AL050303.2-201ENST00000619798 666 ntBASIC20.03■□□□□ 0.8
APLFQ8IW19 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.03■□□□□ 0.8
APLFQ8IW19 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.03■□□□□ 0.8
APLFQ8IW19 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
APLFQ8IW19 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APLFQ8IW19 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
APLFQ8IW19 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APLFQ8IW19 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
APLFQ8IW19 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
APLFQ8IW19 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
APLFQ8IW19 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
APLFQ8IW19 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms