Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF135Q8IUD6 CD177P1-201ENST00000606252 935 ntBASIC21.6■■□□□ 1.05
RNF135Q8IUD6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF135Q8IUD6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF135Q8IUD6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 AC007375.3-201ENST00000600936 2314 ntBASIC21.59■■□□□ 1.05
RNF135Q8IUD6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF135Q8IUD6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.58■■□□□ 1.05
RNF135Q8IUD6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 RN7SL850P-201ENST00000579959 291 ntBASIC21.58■■□□□ 1.05
RNF135Q8IUD6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RNF135Q8IUD6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF135Q8IUD6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 AC091799.1-201ENST00000422823 811 ntBASIC21.57■■□□□ 1.04
RNF135Q8IUD6 CDV3P1-201ENST00000471403 739 ntBASIC21.57■■□□□ 1.04
RNF135Q8IUD6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 AL355075.4-201ENST00000554988 638 ntBASIC21.57■■□□□ 1.04
RNF135Q8IUD6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RNF135Q8IUD6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 AL135905.2-201ENST00000584934 1404 ntBASIC21.56■■□□□ 1.04
RNF135Q8IUD6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 AC124016.1-201ENST00000609552 612 ntBASIC21.56■■□□□ 1.04
RNF135Q8IUD6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF135Q8IUD6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 KRT18P68-201ENST00000392293 1000 ntBASIC21.55■■□□□ 1.04
RNF135Q8IUD6 MTDHP1-201ENST00000605323 784 ntBASIC21.55■■□□□ 1.04
RNF135Q8IUD6 AC113410.3-201ENST00000623366 203 ntBASIC21.55■■□□□ 1.04
RNF135Q8IUD6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms